<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.3 20210610//EN" "JATS-journalpublishing1-3.dtd">
<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">agronauka</journal-id><journal-title-group><journal-title xml:lang="ru">Аграрная наука Евро-Северо-Востока</journal-title><trans-title-group xml:lang="en"><trans-title>Agricultural Science Euro-North-East</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">2072-9081</issn><issn pub-type="epub">2500-1396</issn><publisher><publisher-name>FARC North-East</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.30766/2072-9081.2024.25.5.906-919</article-id><article-id custom-type="elpub" pub-id-type="custom">agronauka-1769</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>ОРИГИНАЛЬНЫЕ СТАТЬИ: ЗООТЕХНИЯ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>ОRIGINAL SCIENTIFIC ARTICLES: ZOOTECHNY</subject></subj-group></article-categories><title-group><article-title>Взаимосвязь распределения пробегов гомозиготности в геноме русских белоснежных кур с продуктивными и адаптивными признаками в зависимости от направленности селекционной работы в породе</article-title><trans-title-group xml:lang="en"><trans-title>The relationship of the distribution of ROH in the genome of Russian snow-white chickens with productive and adaptive traits, depending on the direction of selection</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-1618-6271</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Федорова</surname><given-names>Е. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Fedorova</surname><given-names>E. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Федорова Елена Сергеевна, кандидат биол. наук, старший научный сотрудник лаборатории генетики, разведения и сохранения генетических ресурсов сельскохозяйственных птиц</p><p>д. 55а, Московское шоссе, п. Тярлево, г. Санкт-Петербург, 196625</p></bio><bio xml:lang="en"><p>Elena S. Fedorova, PhD in Biological Science, senior researcher, the Laboratory of genetics, breeding and conservation of genetic resources of farm birds</p><p>Moscow highway, 55a, village Tyarlevo, Saint Petersburg, 196625</p></bio><email xlink:type="simple">Osot2005@yandex.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-0210-9344</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Дементьева</surname><given-names>Н. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Dementieva</surname><given-names>N. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Дементьева Наталия Викторовна, кандидат биол. наук, зав. лабораторией молекулярной генетики</p><p>д. 55а, Московское шоссе, п. Тярлево, г. Санкт-Петербург, 196625</p></bio><bio xml:lang="en"><p>Natalia V. Dementieva, PhD in Biological Science, Head of the <ext-link xlink:href="https://vniigen.ru/laboratoriya-molekulyarnoj-genetiki/" ext-link-type="uri">Laboratory of Molecular Genetics</ext-link></p><p>Moscow highway, 55a, village Tyarlevo, Saint Petersburg, 196625</p></bio><email xlink:type="simple">spbvniigen@mail.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-9504-3916</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Станишевская</surname><given-names>О. И.</given-names></name><name name-style="western" xml:lang="en"><surname>Stanishevskaya</surname><given-names>O. I.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Станишевская Ольга Игоревна, доктор биол. наук, зав. отделом генетики, разведения и сохранения генетических ресурсов сельскохозяйственных птиц</p><p>д. 55а, Московское шоссе, п. Тярлево, г. Санкт-Петербург, 196625</p></bio><bio xml:lang="en"><p>Olga I. Stanishevskaya, DSc in Biological Science, Head of the Laboratory of genetics, breeding and conservation of genetic resources of farm birds</p><p>Moscow highway, 55a, village Tyarlevo, Saint Petersburg, 196625</p></bio><email xlink:type="simple">spbvniigen@mail.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-2362-2892</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Рябова</surname><given-names>А. Е.</given-names></name><name name-style="western" xml:lang="en"><surname>Ryabova</surname><given-names>A. E.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Рябова Анна Евгеньевна, младший научный сотрудник лаборатории молекулярной генетики</p><p>д. 55а, Московское шоссе, п. Тярлево, г. Санкт-Петербург, 196625</p></bio><bio xml:lang="en"><p>Anna E. Ryabova, junior researcher, the <ext-link xlink:href="https://vniigen.ru/laboratoriya-molekulyarnoj-genetiki/" ext-link-type="uri">Laboratory of Molecular Genetics</ext-link></p><p>Moscow highway, 55a, village Tyarlevo, Saint Petersburg, 196625</p></bio><email xlink:type="simple">spbvniigen@mail.ru</email><xref ref-type="aff" rid="aff-1"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru"><institution>Всероссийский научно-исследовательский институт генетики и разведения сельскохозяйственных животных – филиал ФГБНУ «Федеральный исследовательский центр животноводства – ВИЖ имени академика Л. К. Эрнста»</institution><country>Россия</country></aff><aff xml:lang="en"><institution>All-Russian Research Institute of Genetics and Breeding of Farm Animals – Branch of the Federal Research Center for Animal Husbandry named after Academy Member L. K. Ernst</institution><country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2024</year></pub-date><pub-date pub-type="epub"><day>31</day><month>10</month><year>2024</year></pub-date><volume>25</volume><issue>5</issue><elocation-id>906–919</elocation-id><permissions><copyright-statement>Copyright &amp;#x00A9; Федорова Е.С., Дементьева Н.В., Станишевская О.И., Рябова А.Е., 2024</copyright-statement><copyright-year>2024</copyright-year><copyright-holder xml:lang="ru">Федорова Е.С., Дементьева Н.В., Станишевская О.И., Рябова А.Е.</copyright-holder><copyright-holder xml:lang="en">Fedorova E.S., Dementieva N.V., Stanishevskaya O.I., Ryabova A.E.</copyright-holder><license xml:lang="ru" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>Данная работа распространяется под лицензией Creative Commons Attribution 4.0.</license-p></license><license xml:lang="en" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://www.agronauka-sv.ru/jour/article/view/1769">https://www.agronauka-sv.ru/jour/article/view/1769</self-uri><abstract><p>В последние годы все большее внимание уделяется проблеме сохранения генетического разнообразия сельскохозяйственных животных и птиц. Однако непременным условием экономической целесообразности сохранения любой породы является не только ее уникальность, но и возможность практического использования. Примером может служить русская белоснежная порода кур в биоресурсной коллекции ВНИИГРЖ. Она была создана путем селекции русских белых кур на терморезистентность в условиях низких температур, а также на устойчивость к неопластическим заболеваниям. В настоящее время данная порода является специализированной для целей биопромышленности (сырье для производства эмбриональных вирусных вакцин). Изменение направления селекционной работы привело к модификации генетической структуры популяции. Постоянное селективное  давление на один конкретный признак может привести к уменьшению изменчивости вокруг геномных областей, связанных с этим признаком. Поэтому понимание генетических механизмов, приводящих к фенотипической дифференциации, требует идентификации областей в геноме, которые находились под давлением отбора. Изучение показателей пробегов гомозиготности (ROH) может предоставить полезную информацию об истории отбора популяции, а также позволить лучше понять отношения генотип-фенотип за счет открытия генов, которые находятся или находились под давлением отбора. В специфичных для двух поколений кур островках ROH аннотированы наиболее релевантные гены-кандидаты, связанные с адаптационными признаками. Установлено, что генетический анализ на основе изменения ROH может использоваться для характеристики генетического профиля кур и изменения структуры популяции под воздействием селекционного давления. Эти данные особенно важно учитывать при оценке качественных фенотипических признаков, таких как адаптационные возможности организма.  </p></abstract><trans-abstract xml:lang="en"><p>In recent years, increasing attention has been paid to the problem of preserving the genetic diversity of farm animals and poultry. However, an indispensable condition for the economic feasibility of preserving any breed is not only its uniqueness, but also the possibility of practical use. An example is the Russian snow-white breed of chickens in the VNIIGRZh bioresource collection. It was developed by breeding of Russian white chickens for thermal resistance at low temperature conditions, as well as for resistance to neoplastic diseases. Currently, this breed is specialized for the purposes of the bio-industry (raw materials for the production of embryonic viral vaccines). The change in the direction of breeding work led to a modification of the genetic structure of the population. Constant selective pressure on one particular trait can lead to a decrease in variability around the genomic regions associated with that trait. Therefore, understanding the genetic mechanisms leading to phenotypic differentiation requires the identification of regions in the genome that were under selection pressure. The study of runs of  homozygosity (ROH) rates can provide useful information about the history of population selection, as well as allow for a better understanding of the genotype-phenotype relationship by discovering genes that are or were under selection pressure. In ROH islands specific to two generations of chickens, the most relevant candidate genes associated with adaptive traits are annotated. It has been established that genetic analysis based on changes in ROH can be used to characterize the genetic profile of chickens and to change the structure of the population under the influence of selection pressure. These data are especially important to take into account when evaluating qualitative phenotypic features, such as the adaptive capabilities of chickens.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>селекция</kwd><kwd>поколения отбора</kwd><kwd>гомозиготные районы</kwd><kwd>инбридинг</kwd><kwd>гены-кандидаты</kwd><kwd>русская белоснежная порода</kwd></kwd-group><kwd-group xml:lang="en"><kwd>selection</kwd><kwd>breeding generations</kwd><kwd>runs of homozygosity</kwd><kwd>inbreeding</kwd><kwd>candidate genes</kwd><kwd>Russian snow-white breed</kwd></kwd-group><funding-group><funding-statement xml:lang="ru">работа выполнена при поддержке Минобрнауки России в рамках Государственного задания ФГБНУ «Федеральный исследовательский центр животноводства – ВИЖ имени академика Л. К. Эрнста» (тема № 124020200029-4).   Авторы благодарят рецензентов за их вклад в экспертную оценку этой работы.</funding-statement><funding-statement xml:lang="en">the research was carried out under the support of the Ministry of Science and Higher Education of the Russian Federation within the state assignment of the Federal Research Center for Animal Husbandry named after Academy Member L. K. Ernst (theme No. 124020200029-4).   The authors thank the reviewers for their contribution to the expert evaluation of this work.</funding-statement></funding-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Федорова Е. С., Станишевская О. И. Пути сохранения и использования генофондных пород и популяций сельскохозяйственных птиц на примере русской белой породы кур. Птицеводство. 2020;(7-8):5–10. DOI: https://doi.org/10.33845/0033-3239-2020-69-7-8-5-10 EDN: ECEELP</mixed-citation><mixed-citation xml:lang="en">Fedorova E. S., Stanishevskaya O. I. New possibilities of the preservation and practical usage of rare breeds and populations of poultry: the case of russian white chicken breed. Ptitsevodstvo. 2020;(7-8):5–10. (In Russ.).  DOI: https://doi.org/10.33845/0033-3239-2020-69-7-8-5-10</mixed-citation></citation-alternatives></ref><ref id="cit2"><label>2</label><citation-alternatives><mixed-citation xml:lang="ru">Stanishevskaya O. I., Fedorova E. S. Dosed exposure to low temperature as a breeding background in the selection of gene pool breeds of chickens for viral vaccines production. The Open Agriculture Journal. 2020;14:345–351. DOI: https://doi.org/10.2174/1874331502014010345</mixed-citation><mixed-citation xml:lang="en">Stanishevskaya O. I., Fedorova E. S. Dosed exposure to low temperature as a breeding background in the selection of gene pool breeds of chickens for viral vaccines production. The Open Agriculture Journal. 2020;14:345–351. DOI: https://doi.org/10.2174/1874331502014010345</mixed-citation></citation-alternatives></ref><ref id="cit3"><label>3</label><citation-alternatives><mixed-citation xml:lang="ru">Chang C. C., Chow C. C., Tellier L. C., Vattikuti S., Purcell S. M., Lee J. J. Second-generation PLINK: rising to the challenge of larger and richer datasets. Gigascience. 2015;4(1):s13742-015-0047-8. DOI: https://doi.org/10.1186/s13742-015-0047-8</mixed-citation><mixed-citation xml:lang="en">Chang C. C., Chow C. C., Tellier L. C., Vattikuti S., Purcell S. M., Lee J. J. Second-generation PLINK:  rising to the challenge of larger and richer datasets. Gigascience. 2015;4(1):s13742-015-0047-8. DOI: https://doi.org/10.1186/s13742-015-0047-8</mixed-citation></citation-alternatives></ref><ref id="cit4"><label>4</label><citation-alternatives><mixed-citation xml:lang="ru">Purcell S., Neale B., Todd-Brown K., Thomas L., Ferreira M. A. R., Bender D., et. al. PLINK: A tool set for whole-genome association and population-based linkage analyses. American Journal of Human Genetics. 2007;81(3):559–575. DOI: https://doi.org/10.1086/519795</mixed-citation><mixed-citation xml:lang="en">Purcell S., Neale B., Todd-Brown K., Thomas L., Ferreira M. A. R., Bender D., et. al. PLINK: A tool set for whole-genome association and population-based linkage analyses. American Journal of Human Genetics. 2007;81(3):559–575. DOI: https://doi.org/10.1086/519795</mixed-citation></citation-alternatives></ref><ref id="cit5"><label>5</label><citation-alternatives><mixed-citation xml:lang="ru">Ceballos F. C., Joshi P. K., Clark D. W., Ramsay M., Wilson J. F. Runs of homozygosity: windows into population history and trait architecture. Nature Reviews Genetics. 2018;19(4):220–234. DOI: https://doi.org/10.1038/nrg.2017.109</mixed-citation><mixed-citation xml:lang="en">Ceballos F. C., Joshi P. K., Clark D. W., Ramsay M., Wilson J. F. Runs of homozygosity: windows into population history and trait architecture. Nature Reviews Genetics. 2018;19(4):220–234. DOI: https://doi.org/10.1038/nrg.2017.109</mixed-citation></citation-alternatives></ref><ref id="cit6"><label>6</label><citation-alternatives><mixed-citation xml:lang="ru">Hu J., Bumstead N., Barrow P., Sebastiani G., Olien L., Morgan K., Malo D. Resistance to salmonellosis in the chicken is linked to NRAMP1 and TNC. Genome Research. 1997;7:693–704. DOI: https://doi.org/10.1101/gr.7.7.693</mixed-citation><mixed-citation xml:lang="en">Hu J., Bumstead N., Barrow P., Sebastiani G., Olien L., Morgan K., Malo D. Resistance to salmonellosis in the chicken is linked to NRAMP1 and TNC. Genome Research. 1997;7:693–704. DOI: https://doi.org/10.1101/gr.7.7.693</mixed-citation></citation-alternatives></ref><ref id="cit7"><label>7</label><citation-alternatives><mixed-citation xml:lang="ru">Murdamoothoo D., Schwenzer A., Kant J., Rupp T., Marzeda A., Midwood K., Orend G. Investigating cell-type specific functions of tenascin-C. Methods in Cell Biology. 2018;143:401–428. DOI: https://doi.org/10.1016/bs.mcb.2017.08.023</mixed-citation><mixed-citation xml:lang="en">Murdamoothoo D., Schwenzer A., Kant J., Rupp T., Marzeda A., Midwood K., Orend G. Investigating cell-type specific functions of tenascin-C. Methods in Cell Biology. 2018;143:401–428. DOI: https://doi.org/10.1016/bs.mcb.2017.08.023</mixed-citation></citation-alternatives></ref><ref id="cit8"><label>8</label><citation-alternatives><mixed-citation xml:lang="ru">Nawab A., An L., Wu J., Li G., Liu W., Zhao Y., Wu Q., Xiao M. Chicken toll-like receptors and their significance in immune response and disease resistance. International Reviews of Immunology. 2019;38(6):284–306. DOI: https://doi.org/10.1080/08830185.2019.1659258</mixed-citation><mixed-citation xml:lang="en">Nawab A., An L., Wu J., Li G., Liu W., Zhao Y., Wu Q., Xiao M. Chicken toll-like receptors and their significance in immune response and disease resistance. International Reviews of Immunology. 2019;38(6):284–306.  DOI: https://doi.org/10.1080/08830185.2019.1659258</mixed-citation></citation-alternatives></ref><ref id="cit9"><label>9</label><citation-alternatives><mixed-citation xml:lang="ru">St Paul M., Brisbin J. T., Abdul-Careem M. F., Sharif S. Immunostimulatory properties of Toll-like receptor ligands in chickens. Veterinary Immunology and Immunopathology. 2013;152(3-4):191–199. DOI: https://doi.org/10.1016/j.vetimm.2012.10.013</mixed-citation><mixed-citation xml:lang="en">St Paul M., Brisbin J. T., Abdul-Careem M. F., Sharif S. Immunostimulatory properties of Toll-like receptor ligands in chickens. Veterinary Immunology and Immunopathology. 2013;152(3-4):191–199. DOI: https://doi.org/10.1016/j.vetimm.2012.10.013</mixed-citation></citation-alternatives></ref><ref id="cit10"><label>10</label><citation-alternatives><mixed-citation xml:lang="ru">Zhuang Z. X., Chen S. E., Chen C. F., Lin E. C., Huang S. Y. Single-nucleotide polymorphisms in genes related to oxidative stress and ion channels in chickens are associated with semen quality and hormonal responses to thermal stress. The Journal of Thermal Biology. 2022;105:103220. DOI: https://doi.org/10.1016/j.jtherbio.2022.103220</mixed-citation><mixed-citation xml:lang="en">Zhuang Z. X., Chen S. E., Chen C. F., Lin E. C., Huang S. Y. Single-nucleotide polymorphisms in genes related to oxidative stress and ion channels in chickens are associated with semen quality and hormonal responses to thermal stress. The Journal of Thermal Biology. 2022;105:103220. DOI: https://doi.org/10.1016/j.jtherbio.2022.103220</mixed-citation></citation-alternatives></ref><ref id="cit11"><label>11</label><citation-alternatives><mixed-citation xml:lang="ru">Sánchez A. L. B., Wang Q., Thiam M., Wang Z., Zhang J., Zhang Q., et. al. Liver Transcriptome Response to Heat Stress in Beijing You Chickens and Guang Ming Broilers. Genes. 2022;13(3):416. DOI: https://doi.org/10.3390/genes13030416</mixed-citation><mixed-citation xml:lang="en">Sánchez A. L. B., Wang Q., Thiam M., Wang Z., Zhang J., Zhang Q., et. al. Liver Transcriptome Response to Heat Stress in Beijing You Chickens and Guang Ming Broilers. Genes. 2022;13(3):416. DOI: https://doi.org/10.3390/genes13030416</mixed-citation></citation-alternatives></ref><ref id="cit12"><label>12</label><citation-alternatives><mixed-citation xml:lang="ru">Videla Rodriguez E. A., Mitchell J. B. O., Smith V. A. A Bayesian network structure learning approach to identify genes associated with stress in spleens of chickens. Scientific Reports. 2022;12(1):7482. DOI: https://doi.org/10.1038/s41598-022-11633-7</mixed-citation><mixed-citation xml:lang="en">Videla Rodriguez E. A., Mitchell J. B. O., Smith V. A. A Bayesian network structure learning approach  to identify genes associated with stress in spleens of chickens. Scientific Reports. 2022;12(1):7482. DOI: https://doi.org/10.1038/s41598-022-11633-7</mixed-citation></citation-alternatives></ref><ref id="cit13"><label>13</label><citation-alternatives><mixed-citation xml:lang="ru">Cao Y., Zeng T., Han W., Ma X., Gu T., Chen L., et. al. Comparative analysis of liver transcriptome reveals adaptive responses to hypoxia environmental condition in Tibetan Chicken. Animal Biosciences. 2024;37(1):28–38. DOI: https://doi.org/10.5713/ab.23.0126</mixed-citation><mixed-citation xml:lang="en">Cao Y., Zeng T., Han W., Ma X., Gu T., Chen L., et. al. Comparative analysis of liver transcriptome reveals adaptive responses to hypoxia environmental condition in Tibetan Chicken. Animal Biosciences. 2024;37(1):28–38. DOI: https://doi.org/10.5713/ab.23.0126</mixed-citation></citation-alternatives></ref><ref id="cit14"><label>14</label><citation-alternatives><mixed-citation xml:lang="ru">Hosono Y., Abe T., Ishiai M., Islam M. N., Arakawa H., Wang W., et. al. Tumor suppressor RecQL5 controls recombination induced by DNA crosslinking agents. Biochimica et Biophysica Acta (BBA) – Molecular Cell Research. 2014;1843(5):1002–1012. DOI: https://doi.org/10.1016/j.bbamcr.2014.01.005</mixed-citation><mixed-citation xml:lang="en">Hosono Y., Abe T., Ishiai M., Islam M. N., Arakawa H., Wang W., et. al. Tumor suppressor RecQL5  controls recombination induced by DNA crosslinking agents. Biochimica et Biophysica Acta (BBA) – Molecular Cell Research. 2014;1843(5):1002–1012. DOI: https://doi.org/10.1016/j.bbamcr.2014.01.005</mixed-citation></citation-alternatives></ref><ref id="cit15"><label>15</label><citation-alternatives><mixed-citation xml:lang="ru">Xie L., Wang S., Xie Z., Wang X., Wan L., Deng X., et. al. Gallus NME/NM23 nucleoside diphosphate kinase 2 interacts with viral σA and affects the replication of avian reovirus. Veterinary Microbiology. 2021;252:108926. DOI: https://doi.org/10.1016/j.vetmic.2020.108926</mixed-citation><mixed-citation xml:lang="en">Xie L., Wang S., Xie Z., Wang X., Wan L., Deng X., et. al. Gallus NME/NM23 nucleoside diphosphate  kinase 2 interacts with viral σA and affects the replication of avian reovirus. Veterinary Microbiology. 2021;252:108926. DOI: https://doi.org/10.1016/j.vetmic.2020.108926</mixed-citation></citation-alternatives></ref><ref id="cit16"><label>16</label><citation-alternatives><mixed-citation xml:lang="ru">Zhang Y., Gou W., Zhang Y., Zhang H., Wu C. Insights into hypoxic adaptation in Tibetan chicken embryos from comparative proteomics. Comparative Biochemistry and Physiology – Part D: Genomics and Proteomics. 2019;31:100602. DOI: https://doi.org/10.1016/j.cbd.2019.100602</mixed-citation><mixed-citation xml:lang="en">Zhang Y., Gou W., Zhang Y., Zhang H., Wu C. Insights into hypoxic adaptation in Tibetan chicken embryos from comparative proteomics. Comparative Biochemistry and Physiology – Part D: Genomics and Proteomics. 2019;31:100602. DOI: https://doi.org/10.1016/j.cbd.2019.100602</mixed-citation></citation-alternatives></ref><ref id="cit17"><label>17</label><citation-alternatives><mixed-citation xml:lang="ru">Wu H., Zaib G., Luo H., Guo W., Wu T., Zhu Sh., et. al. CCL4 participates in the reprogramming of glucose metabolism induced by ALV-J infection in chicken macrophages. Frontiers in Microbiology. 2023;14:1205143. DOI: https://doi.org/10.3389/fmicb.2023.1205143</mixed-citation><mixed-citation xml:lang="en">Wu H., Zaib G., Luo H., Guo W., Wu T., Zhu Sh., et. al. CCL4 participates in the reprogramming of glucose metabolism induced by ALV-J infection in chicken macrophages. Frontiers in Microbiology. 2023;14:1205143. DOI: https://doi.org/10.3389/fmicb.2023.1205143</mixed-citation></citation-alternatives></ref><ref id="cit18"><label>18</label><citation-alternatives><mixed-citation xml:lang="ru">Schilling M. A., Katani R., Memari S., Cavanaugh M., Buza J., Radzio-Basu J., et. al. Transcriptional Innate Immune Response of the Developing Chicken Embryo to Newcastle Disease Virus Infection. Frontiers in Genetics. 2018;9:00061. DOI: https://doi.org/10.3389/fgene.2018.00061</mixed-citation><mixed-citation xml:lang="en">Schilling M. A., Katani R., Memari S., Cavanaugh M., Buza J., Radzio-Basu J., et. al. Transcriptional Innate Immune Response of the Developing Chicken Embryo to Newcastle Disease Virus Infection. Frontiers in Genetics. 2018;9:00061. DOI: https://doi.org/10.3389/fgene.2018.00061</mixed-citation></citation-alternatives></ref><ref id="cit19"><label>19</label><citation-alternatives><mixed-citation xml:lang="ru">Thornberry N. A., Bull H. G., Calaycay J. R., Chapman K. T., Howard A. D., Kostura M. J. et. al. A novel heterodimeric cysteine protease is required for interleukin-1 beta processing in monocytes. Nature. 1992;356(6372):768–774. DOI: https://doi.org/10.1038/356768a0</mixed-citation><mixed-citation xml:lang="en">Thornberry N. A., Bull H. G., Calaycay J. R., Chapman K. T., Howard A. D., Kostura M. J. et. al. A novel heterodimeric cysteine protease is required for interleukin-1 beta processing in monocytes. Nature. 1992;356(6372):768–774. DOI: https://doi.org/10.1038/356768a0</mixed-citation></citation-alternatives></ref><ref id="cit20"><label>20</label><citation-alternatives><mixed-citation xml:lang="ru">Wang Y., Ning X., Gao P., Wu Sh., Sha M., Lv M., Zhou X., et.al. Inflammasome Activation Triggers Caspase-1-Mediated Cleavage of cGAS to Regulate Responses to DNA Virus Infection. Immunity. 2017;46(3):393–404. DOI: https://doi.org/10.1016/j.immuni.2017.02.011</mixed-citation><mixed-citation xml:lang="en">Wang Y., Ning X., Gao P., Wu Sh., Sha M., Lv M., Zhou X., et.al. Inflammasome Activation Triggers Caspase-1-Mediated Cleavage of cGAS to Regulate Responses to DNA Virus Infection. Immunity. 2017;46(3):393–404. DOI: https://doi.org/10.1016/j.immuni.2017.02.011</mixed-citation></citation-alternatives></ref><ref id="cit21"><label>21</label><citation-alternatives><mixed-citation xml:lang="ru">Wu D., Zhang M., Xu J., Song E., Lv Y., Tang S., et.al. In vitro evaluation of aspirin-induced HspB1 against heat stress damage in chicken myocardial cells. Cell Stress and Chaperones. 2016;21(3):405–413. DOI: https://doi.org/10.1007/s12192-016-0666-8</mixed-citation><mixed-citation xml:lang="en">Wu D., Zhang M., Xu J., Song E., Lv Y., Tang S., et.al. In vitro evaluation of aspirin-induced HspB1 against heat stress damage in chicken myocardial cells. Cell Stress and Chaperones. 2016;21(3):405–413. DOI: https://doi.org/10.1007/s12192-016-0666-8</mixed-citation></citation-alternatives></ref><ref id="cit22"><label>22</label><citation-alternatives><mixed-citation xml:lang="ru">Zhao H., Wu M., Tang X., Li Q., Yi X., Zhao W., Sun X. RNA-seq Based Transcriptome Analysis Reveals The Cross-Talk of Macrophage and Adipocyte of Chicken Subcutaneous Adipose Tissue during The Embryonic and Post-Hatch Period. Frontiers in Immunology. 2022;13:889439. DOI: https://doi.org/10.3389/fimmu.2022.889439</mixed-citation><mixed-citation xml:lang="en">Zhao H., Wu M., Tang X., Li Q., Yi X., Zhao W., Sun X. RNA-seq Based Transcriptome Analysis Reveals The Cross-Talk of Macrophage and Adipocyte of Chicken Subcutaneous Adipose Tissue during The Embryonic and Post-Hatch Period. Frontiers in Immunology. 2022;13:889439. DOI: https://doi.org/10.3389/fimmu.2022.889439</mixed-citation></citation-alternatives></ref><ref id="cit23"><label>23</label><citation-alternatives><mixed-citation xml:lang="ru">Wang Q., Thiam M., Sánchez A. L. B., Wang Z., Zhang J., Li Q., Wen J., Zhao G. Gene Co-Expression Network Analysis Reveals the Hub Genes and Key Pathways Associated with Resistance to Salmonella Enteritidis Colonization in Chicken. International Journal of Molecular Sciences. 2023;24(5):4824. DOI: https://doi.org/10.3390/ijms24054824</mixed-citation><mixed-citation xml:lang="en">Wang Q., Thiam M., Sánchez A. L. B., Wang Z., Zhang J., Li Q., Wen J., Zhao G. Gene Co-Expression Network Analysis Reveals the Hub Genes and Key Pathways Associated with Resistance to Salmonella Enteritidis Colonization in Chicken. International Journal of Molecular Sciences. 2023;24(5):4824. DOI: https://doi.org/10.3390/ijms24054824</mixed-citation></citation-alternatives></ref><ref id="cit24"><label>24</label><citation-alternatives><mixed-citation xml:lang="ru">Bishop G. A., Warren W. D., Berton M. T. Signaling via major histocompatibility complex class II molecules and antigen receptors enhances the B cell response to gp39/CD40 ligand. The European Journal of Immunology. 1995;25(5):1230–1238. DOI: https://doi.org/10.1002/eji.1830250515</mixed-citation><mixed-citation xml:lang="en">Bishop G. A., Warren W. D., Berton M. T. Signaling via major histocompatibility complex class II molecules and antigen receptors enhances the B cell response to gp39/CD40 ligand. The European Journal of Immunology. 1995;25(5):1230–1238. DOI: https://doi.org/10.1002/eji.1830250515</mixed-citation></citation-alternatives></ref><ref id="cit25"><label>25</label><citation-alternatives><mixed-citation xml:lang="ru">Yu F., Raheem M. A., Tan Y., Rahim M. A., Zha L., Zhang J., et.al. Localization of Chicken Rab22a in Cells and Its Relationship to BF or Ii Molecules and Genes. Animals (Basel). 2023;13(3):387. DOI: https://doi.org/10.3390/ani13030387</mixed-citation><mixed-citation xml:lang="en">Yu F., Raheem M. A., Tan Y., Rahim M. A., Zha L., Zhang J., et.al. Localization of Chicken Rab22a in Cells and Its Relationship to BF or Ii Molecules and Genes. Animals (Basel). 2023;13(3):387. DOI: https://doi.org/10.3390/ani13030387</mixed-citation></citation-alternatives></ref><ref id="cit26"><label>26</label><citation-alternatives><mixed-citation xml:lang="ru">Castro P., Liang H., Liang J. C., Nagarajan L. A novel, evolutionarily conserved gene family with putative sequence-specific single-stranded DNA-binding activity. Genomics. 2002;80(1):78–85. DOI: https://doi.org/10.1006/geno.2002.6805</mixed-citation><mixed-citation xml:lang="en">Castro P., Liang H., Liang J. C., Nagarajan L. A novel, evolutionarily conserved gene family with putative sequence-specific single-stranded DNA-binding activity. Genomics. 2002;80(1):78–85. DOI: https://doi.org/10.1006/geno.2002.6805</mixed-citation></citation-alternatives></ref><ref id="cit27"><label>27</label><citation-alternatives><mixed-citation xml:lang="ru">Станишевская О. И., Федорова Е. С. Cравнительная оценка стресс-реактивности организма кур пород русская белая с мутацией sw+ и амрокс на гипотермию в эмбриональном и раннем постнатальном периодах онтогенеза. Сельскохозяйственная биология. 2019;54(6):1135–1143. DOI: https://doi.org/10.15389/agrobiology.2019.6.1135rus EDN: JIVYWR</mixed-citation><mixed-citation xml:lang="en">Stanishevskaya O. I., Fedorova E. S. Comparative evaluation of the peculiarities of stress reactivity of the Russian White breed chicken with sw+ mutation and Amrox in hypothermia conditions during embryonal and early postnatal periods of ontogenesis. Sel'skokhozyaystvennaya biologiya = Agricultural Biology. 2019;54(6):1135–1143. (In Russ.). DOI: https://doi.org/10.15389/agrobiology.2019.6.1135rus</mixed-citation></citation-alternatives></ref><ref id="cit28"><label>28</label><citation-alternatives><mixed-citation xml:lang="ru">Федорова Е. С., Станишевская О. И. Оценка кур генофондных пород и промышленных линий по выходу вакцинного сырья их эмбрионов в сравнительном аспекте. Аграрная наука. 2021;(3):30–33. DOI: https://doi.org/10.32634/0869-8155-2021-346-3-30-33 EDN: OFNUOY</mixed-citation><mixed-citation xml:lang="en">Fedorova E. S., Stanishevskaya O. I. Evaluation of chickens of gene pool breeds and commercial lines on the yield of vaccine raw materials of their embryos in a comparative aspect. Agrarnaya nauka = Agrarian Science. 2021;346(3):30–33. (In Russ.). DOI: https://doi.org/10.32634/0869-8155-2021-346-3-30-33</mixed-citation></citation-alternatives></ref><ref id="cit29"><label>29</label><citation-alternatives><mixed-citation xml:lang="ru">Федорова Е. С., Станишевская О. И. Сравнительная оценка эффективности использования различных пород кур в качестве продуцентов вакцинного сырья для производства гриппозных вакцин. Птицеводство. 2023;(9):13–16. DOI: https://doi.org/10.33845/0033-3239-2023-72-9-13-16 EDN: NKFUMG</mixed-citation><mixed-citation xml:lang="en">Fedorova E. S., Stanishevskaya O. I. Comparative evaluation of developing embryos of different chicken breeds as raw materials for production of influenza vaccines. Ptitsevodstvo. 2023;(9):13–16. (In Russ.). DOI: https://doi.org/10.33845/0033-3239-2023-72-9-13-16</mixed-citation></citation-alternatives></ref><ref id="cit30"><label>30</label><citation-alternatives><mixed-citation xml:lang="ru">Huo S., Wang L., Zhang Y., Zhang J., Zuo Y., Xu J., Cui D., Li X., Zhong F. Molecular cloning of chicken IL-7 and characterization of its antiviral activity against IBDV in vivo. Poultry Science. 2016;95(11):2647–2654. DOI: https://doi.org/10.3382/ps/pew251</mixed-citation><mixed-citation xml:lang="en">Huo S., Wang L., Zhang Y., Zhang J., Zuo Y., Xu J., Cui D., Li X., Zhong F. Molecular cloning of chicken IL-7 and characterization of its antiviral activity against IBDV in vivo. Poultry Science. 2016;95(11):2647–2654. DOI: https://doi.org/10.3382/ps/pew251</mixed-citation></citation-alternatives></ref><ref id="cit31"><label>31</label><citation-alternatives><mixed-citation xml:lang="ru">Tan J., Ge J., Sahaer P., Li H., Sun H. Identification and functional analysis of circRIPK2 in lipopolysaccharide induced chicken macrophages. British Poultry Science. 2023;64(6):678–687. DOI: https://doi.org/10.1080/00071668.2023.2261870</mixed-citation><mixed-citation xml:lang="en">Tan J., Ge J., Sahaer P., Li H., Sun H. Identification and functional analysis of circRIPK2 in lipopolysaccharide induced chicken macrophages. British Poultry Science. 2023;64(6):678–687. DOI: https://doi.org/10.1080/00071668.2023.2261870</mixed-citation></citation-alternatives></ref><ref id="cit32"><label>32</label><citation-alternatives><mixed-citation xml:lang="ru">Romanov M. N., Abdelmanova A. S., Fisinin V. I., Gladyr E. A., Volkova N. A., Koshkina O. A. et.al. Selective footprints and genes relevant to cold adaptation and other phenotypic traits are unscrambled in the genomes of divergently selected chicken breeds. Journal of Animal Science and Biotechnology. 2023;14(1):35. DOI: https://doi.org/10.1186/s40104-022-00813-0</mixed-citation><mixed-citation xml:lang="en">Romanov M. N., Abdelmanova A. S., Fisinin V. I., Gladyr E. A., Volkova N. A., Koshkina O. A. et.al. Selective footprints and genes relevant to cold adaptation and other phenotypic traits are unscrambled in the genomes of divergently selected chicken breeds. Journal of Animal Science and Biotechnology. 2023;14(1):35.  DOI: https://doi.org/10.1186/s40104-022-00813-0</mixed-citation></citation-alternatives></ref><ref id="cit33"><label>33</label><citation-alternatives><mixed-citation xml:lang="ru">Oliveira M., Rodrigues D. R., Guillory V., Kut E., Giotis E. S., Skinner M. A., et.al. Chicken cGAS Senses Fowlpox Virus Infection and Regulates Macrophage Effector Functions. Frontiers in Immunology. 2021;11:613079. DOI: https://doi.org/10.3389/fimmu.2020.613079</mixed-citation><mixed-citation xml:lang="en">Oliveira M., Rodrigues D. R., Guillory V., Kut E., Giotis E. S., Skinner M. A., et.al. Chicken cGAS Senses Fowlpox Virus Infection and Regulates Macrophage Effector Functions. Frontiers in Immunology. 2021;11:613079. DOI: https://doi.org/10.3389/fimmu.2020.613079</mixed-citation></citation-alternatives></ref><ref id="cit34"><label>34</label><citation-alternatives><mixed-citation xml:lang="ru">Li S., Yang J., Zhu Y., Ji X., Wang K., Jiang S., et al. Chicken DNA Sensing cGAS-STING Signal Pathway Mediates Broad Spectrum Antiviral Functions. Vaccines. 2020;8(3):369. DOI: https://doi.org/10.3390/vaccines8030369</mixed-citation><mixed-citation xml:lang="en">Li S., Yang J., Zhu Y., Ji X., Wang K., Jiang S., et al. Chicken DNA Sensing cGAS-STING Signal Pathway Mediates Broad Spectrum Antiviral Functions. Vaccines. 2020;8(3):369. DOI: https://doi.org/10.3390/vaccines8030369</mixed-citation></citation-alternatives></ref><ref id="cit35"><label>35</label><citation-alternatives><mixed-citation xml:lang="ru">Fedorova E. S., Dementieva N. V., Shcherbakov Y. S., Stanishevskaya O. I. Identification of Key Candidate Genes in Runs of Homozygosity of the Genome of Two Chicken Breeds, Associated with Cold Adaptation. Biology (Basel). 2022;11(4):547. DOI: https://doi.org/10.3390/biology11040547</mixed-citation><mixed-citation xml:lang="en">Fedorova E. S., Dementieva N. V., Shcherbakov Y. S., Stanishevskaya O. I. Identification of Key Candidate Genes in Runs of Homozygosity of the Genome of Two Chicken Breeds, Associated with Cold Adaptation. Biology (Basel). 2022;11(4):547. DOI: https://doi.org/10.3390/biology11040547</mixed-citation></citation-alternatives></ref><ref id="cit36"><label>36</label><citation-alternatives><mixed-citation xml:lang="ru">Fujimoto M., Nakai A. The heat shock factor family and adaptation to proteotoxic stress. FEBS Journal. 2010;277(20):4112–4125. DOI: https://doi.org/10.1111/j.1742-4658.2010.07827.x</mixed-citation><mixed-citation xml:lang="en">Fujimoto M., Nakai A. The heat shock factor family and adaptation to proteotoxic stress. FEBS Journal. 2010;277(20):4112–4125. DOI: https://doi.org/10.1111/j.1742-4658.2010.07827.x</mixed-citation></citation-alternatives></ref></ref-list><fn-group><fn fn-type="conflict"><p>The authors declare that there are no conflicts of interest present.</p></fn></fn-group></back></article>
