Evaluation of apple varieties of the Sverdlovsk horticultural breeding station according to the ethylene biosynthesis genes using molecular markers
https://doi.org/10.30766/2072-9081.2020.21.6.706-712
Abstract
One of the directions of apple breeding in the Middle Urals is the development of varieties with a long-term storability. The ability of apples to maintain their consumer qualities for a long period is one of the most important indicators of the variety. A significant role in the storage of apples is played by the amount of ethylene produced in them. The paper presents the results of identification of genes involved in the control of ethylene biosynthesis in apple varieties selected by the Sverdlovsk horticultural breeding station. A total of 21 apple varieties were analyzed. The main objective of the study was to detect Md-ACO1-1 and Md-ACS1-2 alleles in the homozygous state. The combination of these alleles in one genotype reduces the production of ethylene in fruits, which contributes to their long-term storability. The analysis showed the availability of polymorphism in the two studied genes. The Md-ACO1 gene is characterized by the availability of two alleles in most varieties. The homozygous Md-ACO1-1 allele was identified in the Isetskoe pozdnee variety. Analysis of the Md-ACS1 gene revealed the predominance of the Md-ACS1-1 allele form. The Md-ACS1-2 allelic form was observed only in heterozygous samples. No combination of Md-ACO1-1 and Md-ACS1-2 alleles was found in the homozygous state. However, heterozygous forms are also of interest for breeding. They can serve as a source of a character of reduced ethylene biosynthesis when creating varieties with a long-term storability. Such varieties are Sokol yasnyy, Aksena, Rozovatoe zimnee, Sverdlovchanin, Isetskoe pozdnee, Blagaya vest'. The comparison of fruit storage periods and the genotype of the variety has been made. Allelesassociated with a reduced level of ethylene biosynthesis are typical both for the varieties with low and high storability.
Keywords
About the Authors
I. N. ShamshinRussian Federation
Ivan N. Shamshin, PhD in Biology, Head of the Laboratory of Molecular-Genetic Analysis of Fruit Plants
Internatsionalnaya str., 101, Michurinsk, Tambov region, 393760
D. D. Telezhinskiy
Russian Federation
Dmitry D. Telezhinskiy, senior researcher of structural subdivision «Sverdlovsk horticultural breeding station»
116 a, Belinsky Street, Ekaterinburg, 620142
A. V. Shlyavas
Russian Federation
Anna V. Shlyavas, junior researcher
the Department of Fruit Crops Genetic Resources
Bolshaya Morskaya Str., 42, 44, St. Petersburg, 190000,
References
1. Kotov L. A. Selektsionnaya rabota po yablone na Srednem Urale. [Apple breeding in the middle Urals]. Sovremennoe sadovodstvo = Cotemporary horticulture. 2019;(2):13-21. (In Russ.). DOI: https://doi.org/10.24411/2312-6701-2019-10203
2. Savel'ev N. I., Shamshin I. N., Kudryavtsev A. M. Geneticheskiy polimorfizm iskhodnykh form yabloni po allelyam genov dlitel'noy lezhkosti i kachestva plodov. [Apple for the alleles of genes of shelf life and quality of fruits]. Doklady Rossiyskoy akademii sel'skokhozyaystvennykh nauk = Reports of the Russian Academy of agricultural sciences. 2014;(3):17-20. (In Russ.). URL: https://www.elibrary.ru/item.asp?id=21509205
3. Costa F., Cappellin L., Farneti B., Tadiello A., Romano A., Soukoulis C., Sansavini S., Velasco R., Biasioli F. Advances in QTL mapping for ethylene production in apple (Malus×domestica Borkh.). Postharvest Biology and Technology. 2014;87:126-132. DOI: https://doi.org/10.1016/j.postharvbio.2013.08.013
4. Nybom H., Ahmadi-Afzadi M., Sehic J., Hertog M. DNA marker-assisted evaluation of fruit firmness at harvest and post-harvest fruit softening in a diverse apple germplasm. Tree Genetics & Genomes. 2013;9:279-290. DOI: https://doi.org/10.1007/s11295-012-0554-z
5. Slađana M, Milan L. Determination of ETR1 genotypes in promising apple selections developed at Fruit Research Institute – Čačak. Genetika. 2013;45(1):189-196. DOI: https://doi.org/10.2298/GENSR1301189M
6. Suprun I. I., Tokmakov S. V. Allelic diversity of ethylene biosynthesis-related Md-ACS1 and Md-ACO1 genes in the Russian apple germplasm. Russian Journal of Genetics: Applied Research. 2013;3:451-454. DOI: https://doi.org/10.1134/S2079059713060105
7. Shamshin I. N., Shlyavas A. V., Trifonova A. A., Boris K. V., Kudryavtsev A. M. Ethylene and expansin biosynthesis related genes polymorphism in local apple (Malus domestica Borkh.) cultivars from VIR collection of plant genetic resources. Vavilovskii Zhurnal Genetiki i Selektsii = Vavilov Journal of Genetics and Breeding. 2018;22(6):660-666. (In Russ.). DOI: https://doi.org/10.18699/VJ18.408
8. Urbanovich O. Yu., Kozlovskaya Z. A., Zablotskaya E. A., Kartel' N. A. Allel'nyy sostav genov Md-ACO1, Md-ACS1 i Md- Exp7 sortov yabloni (Malus domestica Borkh.) s razlichnym srokom khraneniya plodov. [Allelic diversity of Md-ACS1, Md-ACO1 and Md-EXP7 genes of apple cultivars (Malus x domestica) with different storability]. Izvestiya Natsional'noy akademii nauk Belarusi. Seriya biologicheskikh nauk = Proceedings of the National Academy of Sciences of Belarus. Biological series. 2013;(3):47-55. (In Belarus). URL: https://www.elibrary.ru/item.asp?id=25378568
9. Dougherty L., Zhu Y., Xu K. Assessing the allelotypic effect of two aminocyclopropane carboxylic acid synthase-encoding genes MdACS1 and MdACS3a on fruit ethylene production and softening in Malus. Hortic Res. 2016;3:16024. DOI: https://doi.org/10.1038/hortres.2016.24
10. Chen H., Shao H., Fan S., Ma J., Zhang D., Han M. Identification and phylogenetic analysis of the POLYGALAC-TURONASE gene family in apple. Horticultural Plant Journal. 2016;2(5):241-252. DOI: https://doi.org/10.1016/j.hpj.2017.01.004
11. Chang H. Y., Tong C. Identification of Candidate Genes Involved in Fruit Ripening and Crispness Retention Through Transcriptome Analyses of a ‘Honeycrisp’ Population. Plants. 2020;9(10):1335. DOI: https://doi.org/10.3390/plants9101335
12. Sunako T., Sakuraba W., Senda M., Akada S., Ishikawa R., Niizeki M., Harada T. An allele of the ripening-specific 1-aminocyclopropane-1-carboxylic acid synthase gene (ACS1) in apple fruit with a long storage life. Plant Physiology. 2000;119(4):1297-1304. DOI: https://doi.org/10.1104/pp.119.4.1297
13. Bleecker A. B., Kende H. Ethylene: a gaseous signal molecule in plants. Annual review of cell and developmental biology. 2000;16(1):1-18. DOI: https://doi.org/10.1146/annurev.cellbio.16.1.1
14. Harada T., Sunako T., Wakasa Y., Soejima J., Satoh T., Niizeki M. An allele of the 1-aminocyclopropane-1-carboxylate synthase gene (Md-ACS1) accounts for the low level of ethylene production in climacteric fruits of some apple cultivars. Theoretical and Applied Genetics. 2000;101(5-6):742-746. DOI: https://doi.org/10.1007/s001220051539
15. Costa F., Stella S., Van de Weg W. E., Guerra W., Cecchinel M., Dallavia J., Sansavini S. Role of the genes Md-ACO1 and Md-ACS1 in ethylene production and shelf life of apple (Malus domestica Borkh.). Euphytica. 2005;141(1-2):181-190. DOI: https://doi.org/10.1007/s10681-005-6805-4
16. Defilippi B. G., Kader A. A., Dandekar A. M. Apple aroma: alcohol acyltransferase, a rate limiting step for ester biosynthesis, is regulated by ethylene. Plant Science. 2005;168(5):1199-1210. URL: https://www.ucanr.edu/datastoreFiles/234-449.pdf
17. Costa F., Peace C. P., Stella S., Serra S., Musacchi S., Bazzani M., Van de Weg W.E. QTL dynamics for fruit firmness and softening around an ethylene-dependent polygalacturonase gene in apple (Malus×domestica Borkh.). Journal of Experimental Botany. 2010;61(11):3029-3039. DOI: https://doi.org/10.1093/jxb/erq130
18. Nybom H., Sehic J., Garkava-Gustavsson L. Modern apple breeding is associated with a significant change in the allelic ratio of the ethylene production gene Md-ACS1. The Journal of Horticultural Science and Biotechnology. 2008;83(5):673-677. DOI: https://doi.org/10.1080/14620316.2008.11512442
19. Zhu Y., Barritt B. H. Md-ACS1 and Md-ACO1 genotyping of apple (Malus×domestica Borkh.) breeding parents and suitability for marker-assisted selection. Tree genetics & genomes. 2008;4(3):555-562. DOI: https://doi.org/10.1007/s11295-007-0131-z
20. Kwon Y. S., Kwon S. I., Kim S. A., Kweon H. J., Yoo J., Ryu S., Kim J. H. Estimation of storability for Korean apples (Malus domestica) using Md-ACS1 and Md-ACO1 DNA marker. Korean J. Food Preserv. 2017;24(7):891-897. DOI: https://doi.org/10.11002/kjfp.2017.24.7.891
21. Oraguzie N. C., Iwanami H., Soejima J., Harada T., Hall A. Inheritance of the Md-ACS1 gene and its relationship to fruit softening in apple (Malus×domestica Borkh.). Theoretical and Applied Genetics. 2004;108(8):1526-1533. DOI: https://doi.org/10.1007/s00122-003-1574-8
22. Oraguzie N. C., Volz R. K., Whitworth C. J., Bassett H. C., Hall A. J., Gardiner S. E. Influence of Md-ACS1 allelotype and harvest season within an apple germplasm collection on fruit softening during cold air storage. Postharvest biology and technology. 2007;44(3):212-219. DOI: https://doi.org/10.1016/j.postharvbio.2006.12.013
Review
For citations:
Shamshin I.N., Telezhinskiy D.D., Shlyavas A.V. Evaluation of apple varieties of the Sverdlovsk horticultural breeding station according to the ethylene biosynthesis genes using molecular markers. Agricultural Science Euro-North-East. 2020;21(6):706-712. (In Russ.) https://doi.org/10.30766/2072-9081.2020.21.6.706-712